tasccoda.tree_utils.collapse_singularities

tasccoda.tree_utils.collapse_singularities(tree)

Collapses (deletes) nodes in a toytree tree that are singularities (have only one child).

Parameters
tree : ToyTreeToyTree

A toytree tree object

Return type

ToyTreeToyTree

Returns

  • A toytree tree without singularities

  • tree_new – A toytree tree